Documentation Guide

This page shows an nice overview of the reStructuredText syntax. This is not a comprehensive list of everything you can do, but should be enough to get you up and running to contribute some really nice documentation. It is based on resources found at Sphinx .

To get your own local documentation repository running, simply

Getting Started

Getting Git Right

Learn Git in 15 Minutes Git Tutorial that will help you get started if you prefer. There is also awesome Git Tutorials on the Atlassian Git site. Here is the link on installing Git if you don’t have it yet Git Install

Setting up the Docs Locally

One of the great things about Git and documentation is that all people who contribute are encouraged to setup their own local copy of the docs for off-line editing. This by default will ensure that many backups of the documents exist and there is never any concern about losing them.

Assuming you have Python already, install Sphinx locally:

$ pip install sphinx sphinx-autobuild

Clone the FusionPBX Github documentation repository:

$ cd /path/to/where_you_want_the_docs
$ git clone https://github.com/fusionpbx/fusionpbx-docs.git
$ cd fusionpbx-docs

Edit files or add new ones then build your changes:

$ make html

Open index.html with your web browser and check your changes:

fusionpbx-docs/build/html/index.html

Edit your files and rebuild until you like what you see, then commit your changes and push to the public repository. Assuming the file you changed is called myfile.rst:

$ git add myfile.rst
$ git commit -m 'your commit message'
$ git push -u origin master

Text Formatting

Inline markup and special characters (e.g., bold, italic, verbatim)

There are a few special characters used to format text. The special character * is used to defined bold and italic text as shown in the table below. The backquote character ` is another special character used to create links to internal or external web pages as you will see in section Internal and External Links.

usage syntax HTML rendering
italic *italic* italic
bold **bold** bold
link `python <www.python.org>`__ python
verbatim ``*`` *

The double backquote is used to enter in verbatim mode, which can be used as the escaping character. There are some restrictions about the * and `` syntax. They

  • cannot not be nested,
  • content may not start or end with whitespace: * text* is wrong,
  • it must be separated from surrounding text by non-word characters like a space.

The use of backslash is a work around to second previous restrictions about whitespaces in the following case:

  • this is a *longish* paragraph is correct and gives longish.
  • this is a long*ish* paragraph is not interpreted as expected. You should use this is a long\ *ish* paragraph to obtain longish paragraph

In Python docstrings it will be necessary to escape any backslash characters so that they actually reach reStructuredText. The simplest way to do this is to use raw strings by adding the letter r in front of the docstring.

Python string Typical result
r"""\*escape* \`with` "\\"""" *escape* `with` "\"
"""\\*escape* \\`with` "\\\\"""" *escape* `with` "\"
"""\*escape* \`with` "\\"""" escape with ""

Headings

In order to write a title, you can either underline it or under and overline it. The following examples are correct titles.

*****
Title
*****

subtitle
########

subsubtitle
**********************
and so on

Two rules:

  • If under and overline are used, their length must be identical
  • The length of the underline must be at least as long as the title itself

Normally, there are no heading levels assigned to certain characters as the structure is determined from the succession of headings. However, it is better to stick to the same convention throughout a project. For instance:

  • # with overline, for parts
  • * with overline, for chapters
  • =, for sections
  • -, for subsections
  • ^, for subsubsections
  • , for paragraphs

List and bullets

The following code:

* This is a bulleted list.
* It has two items, the second
  item uses two lines. (note the indentation)

1. This is a numbered list.
2. It has two items too.

#. This is a numbered list.
#. It has two items too.

gives:

  • This is a bulleted list.
  • It has two items, the second item uses two lines. (note the indentation)
  1. This is a numbered list.
  2. It has two items too.
  3. This is a numbered list.
  4. It has two items too.

Note

if two lists are separated by a blanck line only, then the two lists are not differentiated as you can see above.

What are directives

Sphinx and the RST syntax provides directives to include formatted text. As an example, let us consider the code-block syntax. It allows to insert code (here HTML) within your document:

.. code-block:: html
    :linenos:

    <h1>code block example</h1>

Its rendering is:

1
 <h1>code block example</h1>

Here, code-block is the name of the directive. html is an argument telling that the code is in HTML format, lineos is an option telling to insert line number and finally after a blank line is the text to include.

Note that options are tabulated.

Code and Literal blocks

How to include simple code

This easiest way to insert literal code blocks is to end a paragraph with the special marker made of a double coulumn ::. Then, the literal block must be indented:

This is a simple example::

    import math
    print 'import done'

or:

This is a simple example:
::

    import math
    print 'import done'

gives:

This is a simple example:

import math
print 'import done'

code-block directive

By default the syntax of the language is Python, but you can specify the language using the code-block directive as follows:

.. code-block:: html
   :linenos:

   <h1>code block example</h1>

produces

1
<h1>code block example</h1>

Include code with the literalinclude directive

Then, it is also possible to include the contents of a file as follows:

.. literalinclude:: filename
    :linenos:
    :language: python
    :lines: 1, 3-5
    :start-after: 3
    :end-before: 5

Tables

There are several ways to write tables. Use standard reStructuredText tables as explained here. They work fine in HTML output, however, there are some gotchas when using tables for LaTeX output.

The rendering of the table depends on the CSS/HTML style, not on sphinx itself.

Simple tables

Simple tables can be written as follows:

+---------+---------+-----------+
| 1       |  2      |  3        |
+---------+---------+-----------+

which gives:

1 2 3

Size of the cells can be adjusted as follows:

+---------------------+---------+---+
|1                    |        2| 3 |
+---------------------+---------+---+

renders as follows:

1 2 3

This syntax is quite limited, especially for multi cells/columns.

Multicells tables, first method

A first method is the following syntax:

+------------+------------+-----------+
| Header 1   | Header 2   | Header 3  |
+============+============+===========+
| body row 1 | column 2   | column 3  |
+------------+------------+-----------+
| body row 2 | Cells may span columns.|
+------------+------------+-----------+
| body row 3 | Cells may  | - Cells   |
+------------+ span rows. | - contain |
| body row 4 |            | - blocks. |
+------------+------------+-----------+

gives:

Header 1 Header 2 Header 3
body row 1 column 2 column 3
body row 2 Cells may span columns.
body row 3 Cells may span rows.
  • Cells
  • contain
  • blocks.
body row 4

Multicells table, second method

The previous syntax can be simplified:

=====  =====  ======
   Inputs     Output
------------  ------
  A      B    A or B
=====  =====  ======
False  False  False
True   False  True
=====  =====  ======

gives:

Inputs Output
A B A or B
False False False
True False True

Note

table and latex documents are not yet compatible in sphinx, and you should therefore precede them with the a special directive (.. htmlonly::)

The tabularcolumns directive

The previous examples work fine in HTML output, however there are some gotchas when using tables in LaTeX: the column width is hard to determine correctly automatically. For this reason, the following directive exists:

.. tabularcolumns:: column spec

This directive gives a “column spec” for the next table occurring in the source file. It can have values like:

|l|l|l|

which means three left-adjusted (LaTeX syntax). By default, Sphinx uses a table layout with L for every column. This code:

.. tabularcolumns:: |l|c|p{5cm}|

+--------------+---+-----------+
|  simple text | 2 | 3         |
+--------------+---+-----------+

gives

title    
simple text 2 3

The csv-table directive

Finally, a convenient way to create table is the usage of CSV-like syntax:

.. csv-table:: a title
   :header: "name", "firstname", "age"
   :widths: 20, 20, 10

   "Smith", "John", 40
   "Smith", "John, Junior", 20

that is rendered as follows:

a title
name firstname age
Smith John 40
Smith John, Junior 20

The toctree directive

Sooner or later you will want to structure your project documentation by having several RST files. The toctree directive allows you to insert other files within a RST file. The reason to use this directive is that RST does not have facilities to interconnect several documents, or split documents into multiple output files. The toctree directive looks like

.. toctree::
    :maxdepth: 2
    :numbered:
    :titlesonly:
    :glob:
    :hidden:

    intro.rst
    chapter1.rst
    chapter2.rst

It includes 3 RST files and shows a TOC that includes the title found in the RST documents.

Here are a few notes about the different options

  • maxdepth is used to indicates the depth of the tree.
  • numbered adds relevant section numbers.
  • titlesonly adds only the main title of each document
  • glob can be used to indicate that * and ? characters are used to indicate patterns.
  • hidden hides the toctree. It can be used to include files that do not need to be shown (e.g. a bibliography).

The glob option works as follows:

.. toctree::
    :glob:

    intro*
    recipe/*
    *

Note also that the title that appear in the toctree are the file’s title. You may want to change this behaviour by changing the toctree as follows:

.. toctree::
    :glob:

    Chapter1 description <chapter1>

So that the title of this section is more meaningful.

Images and figures

Include Images

Use:

.. image:: _static/images/logo.png
    :width: 200px
    :align: center
    :height: 100px
    :alt: alternate text

to put an image

alternate text

Include a Figure

.. figure:: _static/images/logo.png
    :width: 200px
    :align: center
    :height: 100px
    :alt: alternate text
    :figclass: align-center

    figure are like images but with a caption

    and whatever else youwish to add

    .. code-block:: python

        import image

gives

alternate text

figure are like images but with a caption

and whatever else youwish to add

import image

The option figclass is a CSS class that can be tuned for the final HTML rendering.

Boxes

Colored boxes: note, seealso, todo and warnings

There are simple directives like seealso that creates nice colored boxes:

See also

This is a simple seealso note.

created using:

.. seealso:: This is a simple **seealso** note.

You have also the note directive:

Note

This is a note box.

with

.. note::  This is a **note** box.

and the warning directive:

Warning

note the space between the directive and the text

generated with:

.. warning:: note the space between the directive and the text

There is another todo directive but requires an extension. See Useful extensions

Topic directive

A Topic directive allows to write a title and a text together within a box similarly to the note directive.

This code:

.. topic:: Your Topic Title

    Subsequent indented lines comprise
    the body of the topic, and are
    interpreted as body elements.

gives

Your Topic Title

Subsequent indented lines comprise the body of the topic, and are interpreted as body elements.

Others

Comments

Comments can be made by adding two dots at the beginning of a line as follows:

.. comments

Substitutions

Substitutions are defined as follows:

.. _Python: http://www.python.org/

and to refer to it, use the same syntax as for the internal links: just insert the alias in the text (e.g., Python_, which appears as Python ).

A second method is as follows:

.. |longtext| replace:: this is a very very long text to include

and then insert |longtext| wherever required.

glossary, centered, index, download and field list

Field list

Whatever:this is handy to create new field and the following text is indented
:Whatever: this is handy to create new field

glossary

.. glossary::
     apical
        at the top of the plant.

gives

apical
at the top of the plant.

index

.. index::

download

:download:`download samplet.py <_downloads/sample.py>`

gives download sample.py

hlist directive

hlist can be use to set a list on several columns.

.. hlist::
.. hlist::
    :columns: 3

    * first item
    * second item
    * 3d item
    * 4th item
    * 5th item
  • first item
  • second item
  • 3d item
  • 4th item
  • 5th item

Footnote

For footnotes, use [#name]_ to mark the footnote location, and add the footnote body at the bottom of the document after a “Footnotes” rubric heading, like so:

Some text that requires a footnote [#f1]_ .

.. rubric:: Footnotes

.. [#f1] Text of the first footnote.

You can also explicitly number the footnotes ([1]_) or use auto-numbered footnotes without names ([#]_). Here is an example [1].

Citations

Citation references, like [CIT2002] may be defined at the bottom of the page:

.. [CIT2002] A citation
          (as often used in journals).

and called as follows:

[CIT2002]_

More about aliases

Directives can be used within aliases:

.. |logo| image:: _static/images/logo.png
    :width: 20pt
    :height: 20pt

Using this image alias, you can insert it easily in the text |logo|, like this logo. This is especially useful when dealing with complicated code. For instance, in order to include 2 images within a table do as follows:

+---------+---------+-----------+
| |logo|  | |logo|  | |longtext||
+---------+---------+-----------+
logo logo this is a longish text to include within a table and which is longer than the width of the column.

Note

Not easy to get exactly what you want though.

Intersphinx

When you create a project, Sphinx generates a file containing an index to all the possible links (title, classes, functions, ...).

You can refer to those index only if Sphinx knowns where to find this index. THis is possible thanks to the intersphinx option in your configuration file.

For instance, Python provides such a file, by default Sphinx knows about it. The following code can be found at the end of a typical Sphinx configuration file. Complete it to your needds:

# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'http://docs.python.org/': None, }

file-wide metadata

when using the following syntax:

:fieldname: some contents

some special keywords are recognised. For instance, orphan, nocomments, tocdepth.

An example of rendering is the toctree of top of this page.

orphan

Sometimes, you have an rst file, that is not included in any rst files (when using include for instance). Yet, there are warnings. If you want to supprresse the warnings, include this code in the file:

:orphan:

There is also tocdepth and nocomments metadata. See Sphinx homepage.

metainformation

.. sectionauthor:: name <email>

Specifies the author of the current section.:

.. sectionauthor:: John Smith <js@python.org>

By default, this markup isn’t reflected in the output in any way, but you can set the configuration value show_authors to True to make them produce a paragraph in the output.

contents directives

.. contents::
.. contents:: a title for the contents
    :depth: 2
  • depth indicates the max section depth to be shown in the contents

Useful extensions

In the special file called conf.py, there is a variable called extensions. You can add extension in this variable. For instance:

extensions = [-
    'easydev.copybutton',
    'sphinx.ext.autodoc',
    'sphinx.ext.autosummary',
    'sphinx.ext.coverage',
    'sphinx.ext.graphviz',
    'sphinx.ext.doctest',
    'sphinx.ext.intersphinx',
    'sphinx.ext.todo',
    'sphinx.ext.coverage',
    'sphinx.ext.pngmath',
    'sphinx.ext.ifconfig',
    'matplotlib.sphinxext.only_directives',
    'matplotlib.sphinxext.plot_directive',
 ]

pngmath: Maths and Equations with LaTeX

The extension to be added is the pngmath from sphinx:

extensions.append('sphinx.ext.pngmath')

In order to include equations or simple Latex code in the text (e.g., \(\alpha \leq \beta\) ) use the following code:

:math:`\alpha > \beta`

Warning

The math markup can be used within RST files (to be parsed by Sphinx) but within your python’s docstring, the slashes need to be escaped ! :math:`\alpha` should therefore be written :math:`\\alpha` or put an “r” before the docstring

Note also, that you can easily include more complex mathematical expressions using the math directive:

.. math::

    n_{\mathrm{offset}} = \sum_{k=0}^{N-1} s_k n_k

Here is another:

\[n_{\mathrm{offset}} = \sum_{k=0}^{N-1} s_k n_k\]

It seems that there is no limitations to LaTeX usage:

\[s_k^{\mathrm{column}} = \prod_{j=0}^{k-1} d_j , \quad s_k^{\mathrm{row}} = \prod_{j=k+1}^{N-1} d_j .\]

TODO extension

Similarly to the note directive, one can include todo boxes but it requires the sphinx.ext.todo extension to be added in the conf.py file by adding two lines of code:

extensions.append('sphinx.ext.todo')
todo_include_todos=True

Todo

a todo box

Footnotes

[1]this is a footnote aimed at illustrating the footnote capability.

Bibliography

[CIT2002]A citation (as often used in journals).